| Fecha 16 | A la Fecha 16 | |||||||||
| GRAND PRIX OF MALASYA | World Championship | |||||||||
| Pos. | Rider | Nation | Team | Total time | Pos. | Rider | Nation | Team | Points | |
| 1 | C. STONER | AUS | Ducati Marlboro Team | 47'24.834 | 1 | Valentino ROSSI | ITA | Fiat Yamaha Team | 286 | |
| 2 | D. PEDROSA | SPA | Repsol Honda Team | 14.666 | 2 | Jorge LORENZO | SPA | Fiat Yamaha Team | 245 | |
| 3 | V. ROSSI | ITA | Fiat Yamaha Team | 19.385 | 3 | Casey STONER | AUS | Ducati Marlboro Team | 220 | |
| 4 | J. LORENZO | SPA | Fiat Yamaha Team | 25.85 | 4 | Dani PEDROSA | SPA | Repsol Honda Team | 209 | |
| 5 | N. HAYDEN | USA | Ducati Marlboro Team | 38.705 | 5 | Andrea DOVIZIOSO | ITA | Repsol Honda Team | 152 | |
| 6 | C. VERMEULEN | AUS | Rizla Suzuki MotoGP | 41.061 | 6 | Colin EDWARDS | USA | Monster Yamaha Tech 3 | 148 | |
| 7 | T. ELIAS | SPA | San Carlo Honda Gresini | 48.555 | 7 | Marco MELANDRI | ITA | Hayate Racing Team | 108 | |
| 8 | M. MELANDRI | ITA | Hayate Racing Team | 55.557 | 8 | Loris CAPIROSSI | ITA | Rizla Suzuki MotoGP | 108 | |
| 9 | L. CAPIROSSI | ITA | Rizla Suzuki MotoGP | + 1'00.303 | 9 | Alex DE ANGELIS | RSM | San Carlo Honda Gresini | 105 | |
| 10 | M. KALLIO | FIN | Pramac Racing | + 1'00.440 | 10 | Toni ELIAS | SPA | San Carlo Honda Gresini | 105 | |
| 11 | A. ESPARGARO | SPA | Pramac Racing | + 1'01.655 | 11 | Chris VERMEULEN | AUS | Rizla Suzuki MotoGP | 105 | |
| 12 | A. DE ANGELIS | RSM | San Carlo Honda Gresini | + 1'01.847 | 12 | Randy DE PUNIET | FRA | LCR Honda MotoGP | 101 | |
| 13 | C. EDWARDS | USA | Monster Yamaha Tech 3 | + 1'10.778 | 13 | Nicky HAYDEN | USA | Ducati Marlboro Team | 93 | |
| 14 | G. TALMACSI | HUN | Scot Racing Team MotoGP | + 1'15.851 | 14 | James TOSELAND | GBR | Monster Yamaha Tech 3 | 88 | |
| 15 | J. TOSELAND | GBR | Monster Yamaha Tech 3 | + 1'50.672 | 15 | Mika KALLIO | FIN | Pramac Racing | 64 | |